yvzB [2019-07-12 09:35:47]

similar to [protein|E0BB77C8F1220E931D16A1FA6B75AE8907C76FDB|flagellin]

locus: BSU35150

pI: 4.24

mw: 17.17 kDa

protein length: 160 aa

gene length: 483 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.1|Motility and chemotaxis] → [category|SW 4.1.1.3|Flagellar proteins/ based on similarity]

Gene

Coordinates: 3,609,420 3,609,902

Phenotypes of a mutant

• No swarming motility on B medium. [Pubmed|19202088]

The protein

Paralogous protein(s)

• [protein|E0BB77C8F1220E931D16A1FA6B75AE8907C76FDB|Hag]:

Structure

• [PDB|6GOW] (the [protein|E0BB77C8F1220E931D16A1FA6B75AE8907C76FDB|flagellin]-[protein|4882FAD988FEDD0E72E4CAFB10C8DE61DDAC23B0|FliS] complex, 66% identity) [pubmed|30068950]

Expression and Regulation

Operons

• genes: [gene|5A94391906ABFE70C5BA14E1E75343BC5805D0D9|yvzB]
  description: [Pubmed|15033535]

Biological materials

Mutant

• MGNA-B647 (yvzB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1646 NBRP B. subtilis, Japan]
• BKE35150 ([gene|5A94391906ABFE70C5BA14E1E75343BC5805D0D9|yvzB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE35150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATCTTTAATTGCAC, downstream forward: _UP4_TAATTTTGAACGGCTATCTC
• BKK35150 ([gene|5A94391906ABFE70C5BA14E1E75343BC5805D0D9|yvzB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK35150 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTCATCTTTAATTGCAC, downstream forward: _UP4_TAATTTTGAACGGCTATCTC

References

• 19202088,15033535,30068950